girepository/cmph/chd_structs_ph.h

   1 #ifndef __CMPH_CHD_PH_STRUCTS_H__
   2 #define __CMPH_CHD_PH_STRUCTS_H__
   3
   4 #include "hash_state.h"
   5 #include "compressed_seq.h"
   6
   7 struct __chd_ph_data_t
   8 {
   9         compressed_seq_t * cs;  // compressed displacement values
  10         cmph_uint32 nbuckets;   // number of buckets
  11         cmph_uint32 n;          // number of bins
  12         hash_state_t *hl;       // linear hash function
  13 };
  14
  15 struct __chd_ph_config_data_t
  16 {
  17         CMPH_HASH hashfunc;     // linear hash function to be used
  18         compressed_seq_t * cs;  // compressed displacement values
  19         cmph_uint32 nbuckets;   // number of buckets
  20         cmph_uint32 n;          // number of bins
  21         hash_state_t *hl;       // linear hash function
  22
  23         cmph_uint32 m;          // number of keys
  24         cmph_uint8 use_h;       // flag to indicate the of use of a heuristic (use_h = 1)
  25         cmph_uint32 keys_per_bin;//maximum number of keys per bin
  26         cmph_uint32 keys_per_bucket; // average number of keys per bucket
  27         cmph_uint8 *occup_table;     // table that indicates occupied positions
  28 };
  29 #endif