Fix some CTS bugs that cause validation failures

Fix some CTS bugs that cause validation failures

Most of these are misuse of the dstStageMask parameter to
vkCmdPipelineBarrier. The dstStageMask has to be compatible
with the destination access type of the buffer or image.

The other large source of validation errors is a bug
in the CTS framework when calling vkCreateDevice. The
wrong pNext member was used for setting the enabled
features. The effect is that all features were disabled.

Affects:

dEQP-VK.pipeline.push_constant.graphics_pipeline.*
dEQP-VK.pipeline.multisample_shader_builtin.sample_mask.pattern.*
dEQP-VK.*

Components: Vulkan

VK-GL-CTS issue: 862

Change-Id: I58ca4e033d7d66b52c6726a635808b9b747546d8